Modules
not run provisional awaiting approvalWhat are the paper's questions, and which claims answer each?
for Computational modelling identifies key determinants of subregion-specific dopamine dynamics in the striatum · this layer across all papers · json
Provisional
This layer needs a corpus-scope decision that has not been ruled on yet, so what it produces would change if the decision changed. It waits on claim-format, prediction-outcome, relation-vocab.
Awaiting approval
Waiting for approval. That is a statement about the record, not about whether anyone has read this: people read the corpus without stamping what they read, and only a stamp leaves a trace. Approval is an operation on a version, not a step of its own — it is recorded against the version it was granted to, so running this layer again does not carry it forward.
Not run for this paper
What would fill it:
python3 scripts/pipeline.py run ejdrup-2026-dopamine modulesHow it is defined
What this layer reads besides its dependencies. Each is a declared input: its content is hashed into every run, so editing one makes those runs stale.
The declaration names this path and the repository does not have it. An input that does not exist hashes to nothing, so it cannot make a run stale — the layer is declared to depend on something it is not in fact tracking.
Artifacts
- runs/ejdrup-2026-dopamine/modules.json · not produced
- views/ejdrup-2026-dopamine.modules.json · not produced
This layer across the corpus
Across the corpus
9 not run · 1 blocked upstream·a paper links to its own cell, where this layer's output for it is rendered
| Paper | State | Version | Last run | Output | Cell |
|---|---|---|---|---|---|
| A three-dimensional immunofluorescence atlas of the … | not run | — | — | — | json |
| Distinct representational properties of cues and con… | not run | — | — | — | json |
| Computational modelling identifies key determinants … | not run | — | — | — | json |
| Contributions of insula and superior temporal sulcus…ran via scripts/pipeline.py | blocked upstream | v3 | 2026-09-14 | modules.json | json |
| Spatially targeted inhibitory rhythms differentially… | not run | — | — | — | json |
| Feedback of peripheral saccade targets to early fove… | not run | — | — | — | json |
| iGABASnFR2 is an improved genetically encoded protei… | not run | — | — | — | json |
| A deep learning pipeline for mapping in situ network… | not run | — | — | — | json |
| Self-association enhances early attentional selectio… | not run | — | — | — | json |
| Impaired excitability of fast-spiking neurons in a n… | not run | — | — | — | json |
Inputs and outputs
- Reads, besides its dependencies
-
- scripts/modules.py · declared, and not in the repository — it hashes to nothing, so it cannot make a run stale
- Produces
-
- runs/{paper}/modules.json
- views/{paper}.modules.json
One per paper — the table above links each one that exists.
- Views
-
- modules — declared, and nothing renders it yet
Running it
The command comes from the declaration, so this text and what actually runs cannot
diverge. pipeline.py run also runs the unmet dependencies first.
python3 scripts/pipeline.py run <paper> modules
Underneath, that runs python3 scripts/modules.py {paper} --write.