Coverage adjudication

stale · v2 provisional awaiting approval

Of the spans the matcher could not resolve, which are real gaps?

for Spatially targeted inhibitory rhythms differentially affect neuronal integration · this layer across all papers · json

Provisional

This layer needs a corpus-scope decision that has not been ruled on yet, so what it produces would change if the decision changed. It waits on claim-format, relation-vocab.

Awaiting approval

Waiting for approval. That is a statement about the record, not about whether anyone has read this: people read the corpus without stamping what they read, and only a stamp leaves a trace. Approval is an operation on a version, not a step of its own — it is recorded against the version it was granted to, so running this layer again does not carry it forward.

Out of date

These inputs changed after this ran:

  • coverage/headley-2026-inhibitory-rhythms.json

What it produced92 spans

Read from mappings/headley-2026-inhibitory-rhythms.json · 21 KB. adjudicated 2026-09-11by supplied:runs/headley-2026-inhibitory-rhythms/adjudication.answer.json

# uidverdictclaimwhyshatreeclaim_sha
1 results-003 gap — No claim in the tree records that the model itself reproduces all three classes of dendritic spike plus backpropagating action potentials. 6863ce0b d9995058 —
2 results-014 not-an-assertion — A panel label naming the example traces and their colour coding, not a finding. e0b9e4e0 — —
3 results-020 gap — That the model's basal and apical dendrites generate Na+ and NMDA spikes is asserted here but claimed nowhere in the tree. bede850f d9995058 —
4 results-021 gap — The sub-millisecond, non-backpropagation-driven character of dendritic Na+ spikes is asserted here but no claim characterises the spike types the model produces. b2ff001b d9995058 —
5 results-023 gap — The generative conditions for NMDA spikes are asserted here, and the tree has no claim describing how the model's NMDA spikes arise. 7291c964 d9995058 —
6 results-025 gap — The nexus origin and Ca2+-channel basis of Ca2+ spikes is asserted here with no corresponding claim in the tree. 5f917162 d9995058 —
7 results-031 gap — The long apical trunk of L5 neurons and its consequence for tuft-driven spiking is background the tree never states as a claim. 3ef23816 d9995058 —
8 results-036 not-an-assertion — A bare panel label naming the quantity plotted. a1236a09 — —
9 results-037 not-an-assertion — Describes how compartments were grouped for the analysis rather than stating a result. 40d6092c — —
10 results-040 not-an-assertion — A bare panel label pointing to the format of an earlier panel. 8ec2bad9 — —
11 results-042 gap — That the model's compartments differ systematically in electrotonic coupling to the soma is asserted here but not claimed anywhere. 7e8d6c1c d9995058 —
12 results-052 covered na-spikes-couple-2to3ms-before-ap This is the 2-3 ms lead of dendritic Na+ spikes over somatic action potentials that the claim states. 02d2ce09 — ce79d257
13 results-055 covered nmda-spikes-couple-25ms-before-ap This is the ~25 ms NMDA-spike lead over somatic action potentials that the claim states. 7e397d64 — 79f1ec67
14 results-059 gap — The electrotonic proximity of the nexus to the apical trunk, and its role in Ca2+ spike propagation, is asserted here with no claim behind it. 836080f3 d9995058 —
15 results-060 covered ca-spikes-couple-20ms-before-ap This is the ~20 ms lead of nexus Ca2+ spikes over somatic action potentials that the claim states. 00b511e1 — 50ed9864
16 results-061 gap — The ordering of apical NMDA spikes before Ca2+ spikes is a result with no claim in the tree. 7ee8ab6e d9995058 —
17 results-063 gap — The proposal that tuft NMDA spikes drive somatic output indirectly, via Ca2+ spikes, is not stated by any claim. f36542c7 d9995058 —
18 results-065 not-an-assertion — Narrates the analysis performed rather than reporting its outcome. 4ac12767 — —
19 results-067 gap — The null result for basal dendrites is a reported finding that no claim accounts for. bdc01511 d9995058 —
20 results-069 not-an-assertion — A bare panel label naming the quantity plotted. 40e10751 — —
21 results-070 not-an-assertion — A bare panel label naming the quantity plotted. a7a2d9cf — —
22 results-071 not-an-assertion — A bare panel label naming the quantity plotted. 99afafcf — —
23 results-072 not-an-assertion — A bare panel label naming the quantity plotted. 65b41aa9 — —
24 results-081 covered distal-inhib-drops-firing-02hz These are the control, distal and perisomatic firing rates the claim states, 5.5 Hz falling to 0.2 Hz under doubled distal inhibition. 41617b38 — ab6e917a
25 results-084 not-an-assertion — A bare panel label naming the three conditions plotted. 07020949 — —
26 results-086 not-an-assertion — Describes the current-step measurement used, not a result. bf8e23bd — —
27 results-091 not-an-assertion — A bare panel label naming the quantity plotted. 1c2c6329 — —
28 results-092 not-an-assertion — A bare panel label pointing to the format of an earlier panel. 62135eff — —
29 results-093 not-an-assertion — A bare panel label naming the quantity plotted. 6f9166eb — —
30 results-096 not-an-assertion — Panel labels and their colour coding, stating no finding of their own. 29cfbc83 — —
31 results-098 not-an-assertion — A bare panel label pointing to the format of an earlier panel. e7d535a2 — —
32 results-100 not-an-assertion — Describes the f-I measurement procedure rather than its outcome. 6e4ad0c8 — —
33 results-104 covered distal-inhib-drops-firing-02hz The claim's 0.2 Hz under distal versus 0.7 Hz under perisomatic inhibition is exactly this comparison of which manipulation cuts firing most. 6afd0bac — ab6e917a
34 results-108 covered perisomatic-inhib-drops-firing-07hz The claim states that perisomatic inhibition leaves dendritic spike rates relatively preserved, which is what this reports. 1008a490 — 01608804
35 results-109 covered distal-inhib-drops-firing-02hz The claim attributes the distal effect to suppression of Ca2+ and NMDA spikes, which is the decrease reported here. cd681390 — ab6e917a
36 results-110 gap — No claim states that Na+ spike rates survive tonic distal inhibition, which matters because the rhythmic case later behaves differently. 8b8a7bd5 d9995058 —
37 results-119 not-an-assertion — States the purpose of the lag manipulation rather than any result. a1d78a93 — —
38 results-121 covered ei-lag-sensitivity-firing-rate The claim that E-I lag reshapes dendritic spiking and its coupling to output is what this example illustrates. 3332145f — 5c6a828c
39 results-125 not-an-assertion — Lists which events were analysed, not what was found. cf006140 — —
40 results-126 gap — The non-monotonic lag profile, with distal suppression peaking near 125 ms and recovering by 500 ms, is a specific result the tree's lag claim does not capture. a13949cb d9995058 —
41 results-127 covered ei-lag-sensitivity-firing-rate Loss of Ca2+-to-soma coordination with increasing lag is the claim's point that timing reshapes dendritic contribution. d2df9151 — 5c6a828c
42 results-134 not-an-assertion — Announces the simulation that follows rather than reporting a result. 275c15ff — —
43 results-135 gap — The paper's parameterization claim covers synaptic drive but not this calibration of rhythm modulation depth against in vivo beta and gamma bursts. 701a62b9 d9995058 —
44 results-140 not-an-assertion — A bare panel label naming example data. f7473e8e — —
45 results-144 not-an-assertion — A bare panel label naming the quantity plotted. 04023906 — —
46 results-146 not-an-assertion — A bare panel label naming the quantity plotted. 11b229f3 — —
47 results-150 not-an-assertion — States the phase convention used in the plots and repeats a figure title. 00bb8367 — —
48 results-152 not-an-assertion — A bare panel label naming the quantity plotted. 9ca7b1f1 — —
49 results-154 not-an-assertion — A bare panel label naming the quantity plotted. d78c78e3 — —
50 results-160 covered beta-bidirectional-dendritic-control The claim asserts phase-dependent control of dendritic spike occurrence by distal beta, which is the modulation reported here. 93075071 — aca00b26
51 results-162 gap — The dissociation between rhythmic and tonic distal inhibition for Na+ spikes is flagged as unexpected here but no claim states it. c9c3951d d9995058 —
52 results-163 covered gamma-perisomatic-no-dendritic-spike-change The claim states that perisomatic gamma leaves dendritic spike rates substantially unaltered. d53e364b — 25b33f21
53 results-167 not-an-assertion — Defines what peak and trough phase mean in these plots. 228a6b36 — —
54 results-168 covered gamma-optimal-perisomatic-ap-modulation The claim asserts phase-dependent modulation of somatic AP voltage threshold by perisomatic gamma, which is the trough-phase threshold drop reported here. 9620b0c9 — 324f7407
55 results-171 gap — A threshold increase during the beta peak, and the off-path shunting account of it, is asserted here while the tree's distal claims predict little threshold change. 5c7fb63c d9995058 —
56 results-172 gap — The membrane-potential decrease during the beta peak, and its attribution to suppressed dendritic spikes, is claimed nowhere. 494a04fb d9995058 —
57 results-180 not-an-assertion — A figure-supplement title, not a stated finding. 18020469 — —
58 results-193 gap — The swapped-location control, where phase modulation of firing survives but overall spiking collapses, has no claim behind it. c7e2c0de d9995058 —
59 results-194 gap — The null effect on Ca2+ and NMDA spikes when each rhythm is delivered to the wrong compartment is an unclaimed control result. 2b08b78e d9995058 —
60 results-195 covered hypothesis-frequency-compartment-matching This is the claim's timescale-matching logic in action: slow Ca2+ and NMDA processes escape gamma while sub-millisecond Na+ spikes follow it. 16425abf — aa6a4e83
61 results-197 gap — Dendritic gamma sparing AP threshold while hyperpolarizing the soma is a control result with no claim in the tree. 40de16be d9995058 —
62 results-199 gap — Somatically delivered beta raising threshold and hyperpolarizing at the peak is a control result the tree does not claim. bf845f38 d9995058 —
63 results-206 covered beta-optimal-distal-dendritic-entrainment The claim locates peak distal entrainment near 20 Hz, which is the fall-off above 20 Hz reported here. 2b310c59 — 8ac5c889
64 results-211 covered beta-optimal-distal-dendritic-entrainment The caption states the frequency dependence of distal entrainment that the claim makes. 8e049914 — 8ac5c889
65 results-214 not-an-assertion — A bare panel label naming the example traces shown. e67caf0c — —
66 results-218 not-an-assertion — Explains the colour gradients used to encode onsets and offsets. bc84628d — —
67 results-222 covered beta-bidirectional-dendritic-control Onsets in the trough and offsets at the peak is precisely the bidirectional, within-cycle control the claim asserts. 43f8fe82 — aca00b26
68 results-223 not-an-assertion — Narrates the quantification performed rather than its result. 08d5607d — —
69 results-229 gap — Phase-dependent shifts in mean somatic membrane potential at low rhythm frequencies are unclaimed; the tree's perisomatic sweep claim covers threshold only. 2e0fbf04 d9995058 —
70 results-232 gap — The divergence of momentary membrane-potential fluctuations between peak and trough as frequency rises is a separate result no claim states. a49aead1 d9995058 —
71 results-239 not-an-assertion — A bare panel label naming the quantity plotted. 3ddf2db0 — —
72 results-240 not-an-assertion — A bare panel label naming the quantity plotted. 89719a08 — —
73 results-245 not-an-assertion — Describes how the burst simulations were configured, not what they showed. 2aa5a4b1 — —
74 results-247 not-an-assertion — A bare panel label naming example data. 3b73ce7d — —
75 results-251 not-an-assertion — A bare panel label naming the quantity plotted. 8945d390 — —
76 results-253 not-an-assertion — A bare panel label naming the quantity plotted. a641bb76 — —
77 results-259 covered burst-effects-emerge-first-cycles The claim asserts that gamma bursts phase-modulate action potential timing across the burst, which is the entrainment reported here. 0a0bf2e2 — 822832de
78 results-260 covered gamma-perisomatic-no-dendritic-spike-change The claim's orthogonality point, that perisomatic gamma leaves dendritic spikes alone, holds for bursts as well as tonic rhythms. 3012a8d6 — 25b33f21
79 results-261 covered burst-effects-emerge-first-cycles The claim asserts that beta bursts phase-modulate both dendritic spikes and action potential timing, which is the entrainment reported here. f6f1a3fd — 822832de
80 results-264 not-an-assertion — Describes the clustered-input manipulation that was added, not a result of it. 6fc35a10 — —
81 results-268 not-an-assertion — A bare panel label describing a schematic. 870fd275 — —
82 results-269 not-an-assertion — Explains what the panel plots and how peak and trough are colour coded. f54880b4 — —
83 results-275 not-an-assertion — Explains how the summary measure was computed from the preceding panel. 2bf0dbf9 — —
84 results-281 covered beta-gates-distal-apical-inputs Transmission of distal inputs in the trough and blockade at the peak is exactly the gating the claim asserts. 5d022f02 — 1f8f1334
85 results-282 gap — Beta's suppressive effect on proximal clustered inputs is reported here but no claim covers what beta does outside the distal apical compartment. e336ac79 d9995058 —
86 results-284 covered gamma-gates-proximal-basal-inputs Gamma enhancing proximal inputs in the trough and suppressing them at the peak, while barely touching distal inputs, is the claim's gating pattern. 9726f4a1 — afcfaedc
87 results-285 gap — The gamma half of this summary is claimed, but the suppression of proximal input transmission by beta is not stated anywhere in the tree. 0139677a d9995058 —
88 captions-052 not-an-assertion — States the phase convention used in the plots and gives a figure title. 84d596d5 — —
89 captions-066 not-an-assertion — A panel label deferring to an earlier panel's format, plus a figure title. ead708e9 — —
90 captions-112 not-an-assertion — A figure title for the summary schematic, asserting nothing on its own. a9e868d6 — —
91 tables-001 not-an-assertion — A table title. c164cd25 — —
92 tables-007 not-an-assertion — Raw model-parameter rows drawn from cited measurements, which the paper's parameterization claim already frames as inputs rather than findings. bd70b9e3 — —

How it is defined

A model answers this layer, so the prompt is the layer. It is reproduced below from the committed file, and it is a declared input — editing it makes every run that used it stale.

extract/prompts/coverage-adjudicator.mdthe prompt it runs undernot in the repository

The declaration names this path and the repository does not have it. An input that does not exist hashes to nothing, so it cannot make a run stale — the layer is declared to depend on something it is not in fact tracking.

scripts/adjudicate.pythe script that runs itnot in the repository

The declaration names this path and the repository does not have it. An input that does not exist hashes to nothing, so it cannot make a run stale — the layer is declared to depend on something it is not in fact tracking.

Artifacts

Versions

From the run ledger. There is no changelog beside it to keep in step.

  1. v2 · 2026-09-11 · supplied:runs/headley-2026-inhibitory-rhythms/adjudication.answer.json

    re-validated against the current tree; verdicts now carry the tree fingerprint

    python3 scripts/adjudicate.py headley-2026-inhibitory-rhythms --answer runs/headley-2026-inhibitory-rhythms/adjudication.answer.json

  2. v1 · 2026-09-11 · supplied:runs/headley-2026-inhibitory-rhythms/adjudication.answer.json

    verdicts answered by Claude Opus 5 through --dump-prompt

    python3 scripts/adjudicate.py headley-2026-inhibitory-rhythms --answer runs/headley-2026-inhibitory-rhythms/adjudication.answer.json

This layer across the corpus

Across the corpus

10 stale·a paper links to its own cell, where this layer's output for it is rendered

PaperStateVersionLast runOutputCell
A three-dimensional immunofluorescence atlas of the …re-validated against the current tree; verdicts now carry the tree fingerprintstalev22026-09-11artiushin-2026-spider-atlas.jsonjson
Distinct representational properties of cues and con…re-validated against the current tree; verdicts now carry the tree fingerprintstalev22026-09-11bouyeure-2026-fear-rsa.jsonjson
Computational modelling identifies key determinants …re-validated against the current tree; verdicts now carry the tree fingerprintstalev22026-09-11ejdrup-2026-dopamine.jsonjson
Contributions of insula and superior temporal sulcus…adjudication re-run post-stance (#96)stalev42026-09-12gadeke-2026-guilt-insula.jsonjson
Spatially targeted inhibitory rhythms differentially…re-validated against the current tree; verdicts now carry the tree fingerprintstalev22026-09-11headley-2026-inhibitory-rhythms.jsonjson
Feedback of peripheral saccade targets to early fove…re-validated against the current tree; verdicts now carry the tree fingerprintstalev22026-09-11kammer-2026-foveal-feedback.jsonjson
iGABASnFR2 is an improved genetically encoded protei…ran via scripts/pipeline.pystalev32026-09-13kolb-2026-igabasnfr2.jsonjson
A deep learning pipeline for mapping in situ network…re-validated against the current tree; verdicts now carry the tree fingerprintstalev22026-09-11rozak-2026-neurovascular-dl.jsonjson
Self-association enhances early attentional selectio…re-validated against the current tree; verdicts now carry the tree fingerprintstalev22026-09-11scheller-2026-self-prioritization.jsonjson
Impaired excitability of fast-spiking neurons in a n…ran via scripts/pipeline.pystalev32026-09-13wengert-2026-kcnc1.jsonjson

Inputs and outputs

Reads, besides its dependencies
Produces
  • mappings/{paper}.json

One per paper — the table above links each one that exists.

Views
  • table — rendered above, over the 121 spans in the artifact

Running it

The command comes from the declaration, so this text and what actually runs cannot diverge. pipeline.py run also runs the unmet dependencies first.

python3 scripts/pipeline.py run <paper> adjudication

Underneath, that runs python3 scripts/adjudicate.py {paper} --answer runs/{paper}/adjudication.answer.json.